Epernicus: Pedro Beltrao

Pedro Beltrao

Position:
Post Doctoral Fellow

University of California, San Francisco (San Francisco, CA)
Advisors:
Nevan Krogan, Wendell A. Lim
Degrees:
Past Advisors:
Research:
Evolution of signaling networks in fungi

Communities:

Pedro Beltrao's Genealogy

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Pedro Beltrao's Publications (15)

A human B-cell interactome identifies MYB and FOXM1 as master regulators of proliferation in germinal centers.
Lefebvre C, Rajbhandari P, Alvarez MJ, Bandaru P, Lim WK, Sato M, Wang K, Sumazin P, Kustagi M, Bisikirska BC, Basso K, Beltrao P, Krogan N, Gautier J, Dalla-Favera R, Califano A

Molecular systems biology. 2010 Jun 8;6:377
Quantitative genetic interactions reveal biological modularity.
Beltrao P, Cagney G, Krogan NJ

Cell. 2010 May 28;141(5):739-45
ADAN: a database for prediction of protein-protein interaction of modular domains mediated by linear motifs.
Encinar JA, Fernandez-Ballester G, Sánchez IE, Hurtado-Gomez E, Stricher F, Beltrao P, Serrano L

Bioinformatics (Oxford, England). 2009 Sep 15;25(18):2418-24
Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.
Beltrao P, Trinidad JC, Fiedler D, Roguev A, Lim WA, Shokat KM, Burlingame AL, Krogan NJ

PLoS biology. 2009 Jun 16;7(6):e1000134
Structure-based prediction of the Saccharomyces cerevisiae SH3-ligand interactions.
Fernandez-Ballester G, Beltrao P, Gonzalez JM, Song YH, Wilmanns M, Valencia A, Serrano L

Journal of molecular biology. 2009 May 15;388(4):902-16
Microblogging the ISMB: a new approach to conference reporting.
Saunders N, Beltrão P, Jensen L, Jurczak D, Krause R, Kuhn M, Wu S

PLoS computational biology. 2009 Jan;5(1):e1000263
Evolvability and hierarchy in rewired bacterial gene networks.
Isalan M, Lemerle C, Michalodimitrakis K, Horn C, Beltrao P, Raineri E, Garriga-Canut M, Serrano L

Nature. 2008 Apr 17;452(7189):840-5
Genome-wide prediction of SH2 domain targets using structural information and the FoldX algorithm.
Sánchez IE, Beltrao P, Stricher F, Schymkowitz J, Ferkinghoff-Borg J, Rousseau F, Serrano L

PLoS computational biology. 2008 Apr;4(4):e1000052
Analyzing protein interaction networks using structural information.
Kiel C, Beltrao P, Serrano L

Annual review of biochemistry. 2008;77:415-41
A genome-wide Ras-effector interaction network.
Kiel C, Foglierini M, Kuemmerer N, Beltrao P, Serrano L

Journal of molecular biology. 2007 Jul 27;370(5):1020-32
Structures in systems biology.
Beltrao P, Kiel C, Serrano L

Current opinion in structural biology. 2007 Jun;17(3):378-84
Specificity and evolvability in eukaryotic protein interaction networks.
Beltrao P, Serrano L

PLoS computational biology. 2007 Feb 16;3(2):e25
Comparative genomics and disorder prediction identify biologically relevant SH3 protein interactions.
Beltrao P, Serrano L

PLoS computational biology. 2005 Aug;1(3):e26
SmartCell, a framework to simulate cellular processes that combines stochastic approximation with diffusion and localisation: analysis of simple networks.
Ander M, Beltrao P, Di Ventura B, Ferkinghoff-Borg J, Foglierini M, Kaplan A, Lemerle C, Tomás-Oliveira I, Serrano L

Systems biology. 2004 Jun;1(1):129-38
Comparative evolutionary genomics unveils the molecular mechanism of reassignment of the CTG codon in Candida spp.
Massey SE, Moura G, Beltrão P, Almeida R, Garey JR, Tuite MF, Santos MA

Genome research. 2003 Apr;13(4):544-57

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Pedro Beltrao

Post Doctoral Fellow

Evolution of signaling networks in fungi

Pedro Beltrao's Genealogy

Pedro Beltrao's Publications (15)

Websites