Epernicus: Michael S. Rosenberg, Ph.D.

Michael S. Rosenberg, Ph.D.

Positions:
Associate Professor

School of Life Sciences

Arizona State University (Tempe, AZ)

Associate Professor

Biodesign Institute

Center for Evolutionary Medicine and Informatics

Arizona State University (Tempe, AZ)
Degrees:

Ph.D., Ecology & Evolution, Stony Brook University (Stony Brook, NY)

B.A., Biology, Geology, & Anthropology, Northwestern University (Evanston, IL)
Past Advisors:

Sudhir Kumar (as Post Doctoral Fellow)

Jeffrey Levinton (as Graduate Student - Ph.D.)

Robert R. Sokal (as Technician)
Research:
Computational evolutionary biology and bioinformatics
Other Experience:
1997 Short-term Graduate Fellow, Smithsonian Tropical Research Institute

Communities:

Michael Rosenberg's Genealogy

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Michael Rosenberg's Publications (33)

Recombination and its impact on the genome of the haplodiploid parasitoid wasp Nasonia.
Niehuis O, Gibson JD, Rosenberg MS, Pannebakker BA, Koevoets T, Judson AK, Desjardins CA, Kennedy K, Duggan D, Beukeboom LW, van de Zande L, Shuker DM, Werren JH, Gadau J

PloS one. 2010;5(1):e8597
Testing Hypotheses of Bird Extinctions at Rio Palenque, Ecuador, with Informal Species Lists.
Pearson DL, Anderson CD, Mitchell BR, Rosenberg MS, Navarrete R, Coopmans P

Conservation biology : the journal of the Society for Conservation Biology. 2009 Dec 16
Alignment and topological accuracy of the direct optimization approach via POY and traditional phylogenetics via ClustalW + PAUP*.
Ogden TH, Rosenberg MS

Systematic biology. 2007 Apr;56(2):182-93
How should gaps be treated in parsimony? A comparison of approaches using simulation.
Ogden TH, Rosenberg MS

Molecular phylogenetics and evolution. 2007 Mar;42(3):817-26
Meta-analysis: the past, present and future.
Ainsworth EA, Rosenberg MS, Wang X

The New phytologist. 2007;176(4):742-5
Multiple sequence alignment accuracy and phylogenetic inference.
Ogdenw TH, Rosenberg MS

Systematic biology. 2006 Apr;55(2):314-28
The file-drawer problem revisited: a general weighted method for calculating fail-safe numbers in meta-analysis.
Rosenberg MS

Evolution; international journal of organic evolution. 2005 Feb;59(2):464-8
Inferring species phylogenies from multiple genes: concatenated sequence tree versus consensus gene tree.
Gadagkar SR, Rosenberg MS, Kumar S

Journal of experimental zoology. Part B, Molecular and developmental evolution. 2005 Jan 15;304(1):64-74
Evolutionary distance estimation and fidelity of pair wise sequence alignment.
Rosenberg MS

BMC bioinformatics. 2005;6:102
Multiple sequence alignment accuracy and evolutionary distance estimation.
Rosenberg MS

BMC bioinformatics. 2005;6:278
MySSP: Non-stationary evolutionary sequence simulation, including indels
Michael S. Rosenberg

Evolutionary Bioinformatics Online. 2005;1:81-83
A new protocol for evaluating putative causes for multiple variables in a spatial setting, illustrated by its application to European cancer rates.
Sokal RR, Oden NL, Rosenberg MS, Thomson BA

American journal of human biology : the official journal of the Human Biology Council. 2004 Jan-Feb;16(1):1-16
Meta-analysis in plant pathology: Synthesizing research results
Michael S. Rosenberg, Karen A. Garrett, Z. Su, RL Bowden

Phytopathology. 2004;94(9):1013-1017
Wavelet analysis for detecting anisotropy in point patterns
Michael S. Rosenberg

Journal of Vegetation Science. 2004;15(2):277-284
Patterns of transitional mutation biases within and among mammalian genomes.
Rosenberg MS, Subramanian S, Kumar S

Molecular biology and evolution. 2003 Jun;20(6):988-93
Heterogeneity of nucleotide frequencies among evolutionary lineages and phylogenetic inference.
Rosenberg MS, Kumar S

Molecular biology and evolution. 2003 Apr;20(4):610-21
Taxon sampling, bioinformatics, and phylogenomics.
Rosenberg MS, Kumar S

Systematic biology. 2003 Feb;52(1):119-24
The distance dependence prediction of the Janzen-Connell hypothesis: A meta-analysis
Laura A. Hyatt, Michael S. Rosenberg, Timothy G. Howard, Gregory Bole, Wei Fang, Jean Anastasia, Kerry Brown, Rebecca Grella, Katherine Hinman, Josepha P. Kurdziel, Jessica Gurevitch

Oikos. 2003;103(3):590-602
A balanced view of scaling in spatial statistical analysis
Jennifer L. Dungan, Joe Perry, Mark R.T. Dale, Steve Citron-Pousty, Marie-Josee Fortin, Anna Jakomulska, Pierre Legendre, Maria Miriti, Michael S. Rosenberg

Ecography. 2002;25(5):626-640
Conceptual and mathematical relationships among methods for spatial analysis
Mark R.T. Dale, Phil Dixon, Marie-Josee Fortin, Pierre Legendre, Donald E. Myers, Michael S. Rosenberg

Ecography. 2002;25(5):558-577
Fiddler crab claw shape variation: A geometric morphometric analysis across the genus Uca
Michael S. Rosenberg

Biological Journal of the Linnean Society. 2002;75(2):147-162
Illustration and guidelines for selecting statistical methods for quantifying spatial patterns in ecological data
Joe N. Perry, Andrew Leibhold, Michael S. Rosenberg, Jennifer Dungan, Maria Miriti, Anna Jakomulska, Steve Citron-Pousty

Ecography. 2002;25(5):578-600
Incomplete taxon sampling is not a problem for phylogenetic inference.
Rosenberg MS, Kumar S

Proceedings of the National Academy of Sciences of the United States of America. 2001 Sep 11;98(19):10751-6
Traditional phylogenetic reconstruction methods reconstruct shallow and deep evolutionary relationships equally well.
Rosenberg MS, Kumar S

Molecular biology and evolution. 2001 Sep;18(9):1823-7
The systematics and taxonomy of fiddler crabs: A phylogeny of the genus Uca
Michael S. Rosenberg

Journal of Crustacean Biology. 2001;21(3):839-869

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One Figure

A male fiddler crab of the species Uca stylifera, waving on a mudflat in Panama.

Websites

Rosenberg Lab Website

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