Epernicus: Hugh P Shanahan, Ph.D.

Hugh P Shanahan, Ph.D.

Position:
Lecturer in Bioinformatics

Computer Science

Royal Holloway University of London (Egham, UK)
Degrees:

Ph.D., Physics, University of Edinburgh (Edinburgh, UK)

M.Sc., Physics, University College Cork (Cork, Ireland)

B.Sc., Physics, University College Cork (Cork, Ireland)
Past Advisors:

Janet M. Thornton (as Post Doctoral Fellow)

Akira Ukawa (as Post Doctoral Fellow)

Ian Drummond (as Post Doctoral Fellow)

Yoichi Iwasaki (as Post Doctoral Fellow)

Ron Horgan (as Post Doctoral Fellow)

Christine Davies (as Post Doctoral Fellow)

Richard Kenway (as Graduate Student - Ph.D.)

Niall O'Murachadha (as Graduate Student - Masters)
Research:

Communities:

Hugh Shanahan's Genealogy

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Hugh Shanahan's Publications (14)

Distinct light-initiated gene expression and cell cycle programs in the shoot apex and cotyledons of Arabidopsis.
López-Juez E, Dillon E, Magyar Z, Khan S, Hazeldine S, de Jager SM, Murray JA, Beemster GT, Bögre L, Shanahan H

The Plant cell. 2008 Apr;20(4):947-68
HTHquery: a method for detecting DNA-binding proteins with a helix-turn-helix structural motif.
Ferrer-Costa C, Shanahan HP, Jones S, Thornton JM

Bioinformatics (Oxford, England). 2005 Sep 15;21(18):3679-80
Amino acid architecture and the distribution of polar atoms on the surfaces of proteins.
Shanahan HP, Thornton JM

Biopolymers. 2005 Aug 15;78(6):318-28
An examination of the conservation of surface patch polarity for proteins.
Shanahan HP, Thornton JM

Bioinformatics (Oxford, England). 2004 Sep 22;20(14):2197-204
Identifying DNA-binding proteins using structural motifs and the electrostatic potential.
Shanahan HP, Garcia MA, Jones S, Thornton JM

Nucleic acids research. 2004;32(16):4732-41
Using electrostatic potentials to predict DNA-binding sites on DNA-binding proteins.
Jones S, Shanahan HP, Berman HM, Thornton JM

Nucleic acids research. 2003 Dec 15;31(24):7189-98
Dynamical quark effects on light quark masses
Khan AA, Aoki S, Boyd G, Burkhalter R, Ejiri S, Fukugita M, Hashimoto S, Ishizuka N, Iwasaki Y, Kanaya K, Kaneko T, Kuramashi Y, Manke T, Nagai K, Okawa M, Shanahan HP, Ukawa A, Yoshie T

Physical review letters. 2000 Nov 27;85(22):4674-7
Quenched light hadron spectrum
Aoki S, Boyd G, Burkhalter R, Ejiri S, Fukugita M, Hashimoto S, Iwasaki Y, Kanaya K, Kaneko T, Kuramashi Y, Nagai K, Okawa M, Shanahan HP, Ukawa A, Yoshie T

Physical review letters. 2000 Jan 10;84(2):238-41
Lattice study of semileptonic B decays: B-bar-->Dl nu -bar decays.
Bowler KC, Hazel NM, Henty DS, Hoeber H, Kenway RD, Richards DG, Shanahan HP, Simone JN, Lellouch L, Nieves J, Sachrajda CT, Wittig H

Physical review D: Particles and fields. 1995 Nov 1;52(9):5067-5094
Lattice calculation of the branching ratio for some of the exclusive modes of b-->s gamma.
Bowler KC, Hazel NM, Henty DS, Hoeber H, Kenway RD, Richards DG, Shanahan HP, Simone JN, Flynn JM, Gough BJ

Physical review D: Particles and fields. 1995 May 1;51(9):4955-4970
Lattice calculation of the penguin diagram decay B-->K* gamma.
Bowler KC, Hazel NM, Henty DS, Hoeber H, Kenway RD, Richards DG, Shanahan HP, Simone JN, Flynn JM, Gough BJ

Physical review letters. 1994 Mar 7;72(10):1398-1401
Quenched heavy-light decay constants.
Baxter RM, Booth SP, Bowler KC, Collins S, Henty DS, Kenway RD, Richards DG, Shanahan HP, Simone JN, Simpson AD, Wilkes BE, Ewing AK, Lellouch L, Sachrajda CT, Wittig H

Physical review D: Particles and fields. 1994 Feb 1;49(3):1594-1605
The Isgur-Wise function from the lattice.
Booth SP, Bowler KC, Hazel NM, Henty DS, Hoeber H, Kenway RD, Richards DG, Shanahan HP, Simone JN, Simpson AD, Lellouch L, Nieves J, Sachrajda CT, Wittig H

Physical review letters. 1994 Jan 24;72(4):462-465
There are no R3 x S1 vacuum gravitational instantons.
Ó Murchadha N, Shanahan H

Physical review letters. 1993 Mar 15;70(11):1576-1578

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Hugh P Shanahan, Ph.D.

Lecturer in Bioinformatics

Hugh Shanahan's Genealogy

Hugh Shanahan's Publications (14)